Maize pangenome resources maintained for comparative genomics research
The database integrates representative maize inbred line assemblies and provides a structured portal for sample metadata, pan-genome relationships, gene annotation, synteny, expression profiles, and downstream analysis tools.
Collaborative maize genomic resource
The Maize Pangenome Database is led by the Maize Genomic Breeding Team of Yazhou Bay National Laboratory, in collaboration with the Biotechnology Research Institute of the Chinese Academy of Agricultural Sciences and the Center of Genomics and Bioinformatics at the College of Agriculture, South China Agricultural University.
The database is developed and maintained by the Center of Genomics and Bioinformatics, South China Agricultural University.
To accelerate maize research and breeding by providing a centralized, high-quality pangenome resource for exploring genetic diversity, identifying important genes, and supporting crop improvement.
Data and analysis coverage
Comprehensive Data
High-quality maize genome assemblies and curated sample metadata.
Rich Annotation
Gene function, structure, TE annotation, and related association records.
Comparative Views
Pan-allele, pan-transcriptome, orthogroup, and synteny exploration.
Integrated Tools
BLAST, JBrowse, tag conversion, download, and reannotation entries.
Institutions
Yazhou Bay National Laboratory
Maize Genomic Breeding Team leading the project direction.
Chinese Academy of Agricultural Sciences
Biotechnology Research Institute collaboration.
South China Agricultural University
Center of Genomics and Bioinformatics development and maintenance.